Discussions under General

Oct 7, 2011

10:01 PM
(2 posts)

A utility like UCSC liftover

first post: mkhushi wrote: Just wondering if MBF supply a liftover utility like the one provid...

latest post: Rickbe wrote: The LiftOver utility provided by UCSC converts genome annotations f...

Oct 5, 2011

9:18 PM
(3 posts)

use of HPC pack 2008 to launch Microsoft Assembler like a cluster apliccation

first post: leonardoBio wrote: hey everybody!!!! i'm using a cluster with microsoft technologys wi...

latest post: Rickbe wrote: Leonard and I have exchanged some emails and I wanted to recap for ...

Aug 10, 2011

9:43 PM
(1 post)

Attendance at Hackathon 2011

first post: Rickbe wrote: I was just curious if anyone in the community might be attending Ha...

Jul 21, 2011

8:20 PM
(3 posts)

Another genome browser framework

first post: kathleenxppp wrote: I just listened the MBF introduction in vienna ISMB 2011 conference...

latest post: sjmercer wrote: Hello Wang,Thanks for your interest in MBF, I'm sorry I missed you ...

Jul 18, 2011

4:55 PM
(3 posts)

Venn Diagram based on Genomic Intervals issue

first post: kumar35885 wrote: Hello Everyone,I have results from two ChipSeq experiments. Experi...

latest post: kumar35885 wrote: Thank you for the reply. I am trying to do the following. I have ...

Jun 24, 2011

4:47 PM
(2 posts)

NUCmer parameters "--maxmatch" and "--nooptimize"

first post: rboissy wrote: Hi,The NUCmer aligner in MBF uses different names for some of the M...

latest post: sjmercer wrote: Sending for Bob, who is on vacation: Hi Robert,You should be able t...

May 24, 2011

9:55 PM
(2 posts)

Setting Similarity Matrix in MBF

first post: kponcodeplex2011 wrote: Greetings,I am using Bio library (MBF 2.0) for sequence alignment, ...

latest post: FadiF wrote: Hi kponcodeplex2011One of our Developers gave me the below infromat...

May 5, 2011

3:17 PM
(2 posts)

Where and how do you set match and mismatch score before doing alignment

first post: kponcodeplex2011 wrote: I know we can set GapOpenCost or GapExtensionCost etc. to aligner, ...

latest post: FadiF wrote: Hi Chris, and thanks for your post.One of our developers have sugge...

May 2, 2011

11:56 PM
(1 post)

MBF installer - wrong .dll reference

first post: Rickbe wrote: The V2 beta 1 MBF installer will install .CSproj files to your mach...

Apr 30, 2011

9:30 PM
(20 posts)

Building MBF v2.0 Preview

first post: dourada wrote: Greetings,I downloaded the 2.0 preview source code, compiled it, an...

latest post: bitdisaster wrote: You can unblock the zip file before extracting and then all extract...