Oct 7, 2011

10:01 PM
(2 posts)

A utility like UCSC liftover

first post: mkhushi wrote: Just wondering if MBF supply a liftover utility like the one provid...

latest post: Rickbe wrote: The LiftOver utility provided by UCSC converts genome annotations f...

Oct 5, 2011

9:18 PM
(3 posts)

use of HPC pack 2008 to launch Microsoft Assembler like a cluster apliccation

first post: leonardoBio wrote: hey everybody!!!! i'm using a cluster with microsoft technologys wi...

latest post: Rickbe wrote: Leonard and I have exchanged some emails and I wanted to recap for ...

Aug 10, 2011

9:43 PM
(1 post)

Attendance at Hackathon 2011

first post: Rickbe wrote: I was just curious if anyone in the community might be attending Ha...

Jul 21, 2011

8:20 PM
(3 posts)

Another genome browser framework

first post: kathleenxppp wrote: I just listened the MBF introduction in vienna ISMB 2011 conference...

latest post: sjmercer wrote: Hello Wang,Thanks for your interest in MBF, I'm sorry I missed you ...

Jul 18, 2011

4:55 PM
(3 posts)

Venn Diagram based on Genomic Intervals issue

first post: kumar35885 wrote: Hello Everyone,I have results from two ChipSeq experiments. Experi...

latest post: kumar35885 wrote: Thank you for the reply. I am trying to do the following. I have ...

Jun 24, 2011

4:47 PM
(2 posts)

NUCmer parameters "--maxmatch" and "--nooptimize"

first post: rboissy wrote: Hi,The NUCmer aligner in MBF uses different names for some of the M...

latest post: sjmercer wrote: Sending for Bob, who is on vacation: Hi Robert,You should be able t...

May 24, 2011

9:55 PM
(2 posts)

Setting Similarity Matrix in MBF

first post: kponcodeplex2011 wrote: Greetings,I am using Bio library (MBF 2.0) for sequence alignment, ...

latest post: FadiF wrote: Hi kponcodeplex2011One of our Developers gave me the below infromat...

May 5, 2011

3:17 PM
(2 posts)

Where and how do you set match and mismatch score before doing alignment

first post: kponcodeplex2011 wrote: I know we can set GapOpenCost or GapExtensionCost etc. to aligner, ...

latest post: FadiF wrote: Hi Chris, and thanks for your post.One of our developers have sugge...

May 2, 2011

11:56 PM
(1 post)

MBF installer - wrong .dll reference

first post: Rickbe wrote: The V2 beta 1 MBF installer will install .CSproj files to your mach...

Apr 30, 2011

9:30 PM
(20 posts)

Building MBF v2.0 Preview

first post: dourada wrote: Greetings,I downloaded the 2.0 preview source code, compiled it, an...

latest post: bitdisaster wrote: You can unblock the zip file before extracting and then all extract...

Mar 18, 2011

5:20 PM
(6 posts)

"Page not available" when submitting request via NCBIBLastHandler

first post: acornwell wrote: Just trying to get into using MBF... trying to get submission to N...

latest post: bitdisaster wrote: I have used EBI Blast service over the course of 2 years and never ...

Mar 16, 2011

4:57 PM
(2 posts)

Free MBF Workshop, March 11, Redmond, WA

first post: beatriza wrote: The Microsoft Biology Initiative is hosting a one-day workshop on t...

latest post: beatriza wrote: Thank you for a great MBF workshop! You can find the summary, feedb...

Nov 3, 2010

10:01 AM
(4 posts)

MBF.Workflow package -> NCBI Blast Activity

first post: TendiousX wrote: Hello MBF Developers,I'm aware that the MBF.Workflow package is use...

latest post: TendiousX wrote: Hi tcvinay, thanks for the great help. I appreciate all the effort ...

Oct 21, 2010

11:43 PM
(1 post)

MBF is moving to a new location!

first post: beatriza wrote: Dear MBF contributors,We are in the process of transitioning the ho...

Sep 23, 2010

9:53 AM
(6 posts)

sho runtime

first post: jfelvira wrote: I wonder if there is any doc describing the sho runtime API. Sorry ...

latest post: jfelvira wrote: Thanks for your comments. Of course I fully understand it requires ...

Aug 13, 2010

4:29 PM
(3 posts)

Unable to download

first post: hajjat wrote: Hi, I'm trying to download the files but I keep getting this error:...

latest post: hajjat wrote: Simon, thanks a lot, yes it is working now :)

Jul 24, 2010

10:50 PM
(5 posts)

Does MBF Bio.dll supports Silverlight Application development?

first post: TendiousX wrote: Hello guys,I tried referencing Bio.dll to my Silverlight applicatio...

latest post: Grauenwolf wrote: What about grabbing the missing code from Mono? In the past I've us...

Jul 23, 2010

6:57 PM
(2 posts)

How can bioinformaticist become more involved?

first post: rleduc wrote: Hello MBF Developers,Now that there is a release of MBF v1, what sh...

latest post: rid wrote: Hello Rich, Thanks for the query. Right now we are in the middle of...

Jul 19, 2010

3:11 PM
(2 posts)

WS.Reputation.1 virus - incorrectly identified in Sequence Assembler by Norton

first post: sjmercer wrote: It has come to our attention that users of the Sequence Assembler d...

latest post: sjmercer wrote: Symantec say they have resolved this issue.If you still encounter t...

Jul 6, 2010

10:01 PM
(1 post)

V2 Brainstorming

first post: zyskowski wrote: Please reply to this thread with your input on what V2 should focus...

Jun 28, 2010

6:06 AM
(2 posts)

Batch BLASTp

first post: vforget wrote: Hi,I plan to use the BLAST service offered in MBF to submit roughly...

latest post: VivekX wrote: Vince,Thanks for your queries, please see our responses below:#1 Az...

May 31, 2010

7:00 PM
(2 posts)

Sequence creation without exceptions?

first post: jon7777 wrote: Hi, I am excited to have found MBF and want to use it for a smal...

latest post: rid wrote: Hi Jon,While I understand the desire to restrict the alphabet to di...

May 11, 2010

9:24 PM
(4 posts)

Any chance of getting a digital copy of the handouts from the eScience Workshop (2009)

first post: MatthewLinks wrote: I am just going through the escience presentation that is linked to...

latest post: sjmercer wrote: I have also not been able to locate the handouts from that particul...

May 5, 2010

9:54 PM
(2 posts)

Microsoft Surface

first post: MatthewLinks wrote: Is anyone else looking into using MBF on the Surface? If so any abs...

latest post: sjmercer wrote: I'll ask around the team - but I haven't heard of anyone doing this...

Apr 15, 2010

7:37 PM
(3 posts)

Referencing bio.dll

first post: bitdisaster wrote: HiI trying to play around with MBF and facing weird problem with re...

latest post: bitdisaster wrote: Ok, that was easy. I didn't know that client profile is now the def...

Apr 8, 2010

3:50 PM
(2 posts)

Nice project

first post: bitdisaster wrote: Hi allI'm a Research Associate at University of Victoria and workin...

latest post: rid wrote: Hi Jan,We've been away at a conference, so sorry for the slow reply...

Mar 18, 2010

5:49 AM
(4 posts)

Tests failing on baseline

first post: rbyers wrote: Hi,I'm seeing around 50 test errors and 18 failures with (what I be...

latest post: VivekX wrote: Rick,You are correct, this issue with PAMSAM is also a consequence ...

Mar 16, 2010

5:39 AM
(3 posts)

Expensive ToString and property getters - bad for debugging and against .NET design guidelines

first post: rbyers wrote: Hi,I'm loading some large (but not huge) sequences into a Sequence ...

latest post: rbyers wrote: Thanks Mike! I'll code up a suggested change (including updating an...

Mar 1, 2010

6:58 PM
(3 posts)

Welcome!

first post: sjmercer wrote: Welcome to the Microsoft Biology Foundation (MBF) beta 2!This is a ...

latest post: sjmercer wrote: Hi Srinivasan,We are considering making our documentation available...

Feb 23, 2010

10:52 PM
(1 post)

Updated ER Blog Post

first post: zyskowski wrote: Updated Microsoft Biology Foundation Available for Free Download!

Feb 23, 2010

10:26 PM
(4 posts)

How I can add myself as a developer for MBF

first post: firelake wrote: I am following instructions in Onboarding New Members doc to setup ...

latest post: zyskowski wrote: I'd like to address this issue as well.First, we should have been c...

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